August 2017: GeneSpring GX 14.9 version is available

GeneSpring GX 14.9 version provides support for downstream analysis of externally quantified RNA-Seq data. This allows to perform expression analysis on quantified RNA-Seq data and enables visualization and biological contextualization. This version also supports import of data from Affymetrix transcriptome arrays including HTA, MTA, RTA, and Clariom to perform expression and splicing analysis. Splicing analysis visualization has been improved to measure exon and junction probesets in the context of reference transcript models from Ensembl, RefSeq, or UCSC. This version also supports performing data normalization and correlation analysis using a custom R-Script and four sample custom R-scripts have been included. In this version, filtering of entities based on Shapiro Wilk or D’Augostino Pearson test of normality can be performed for further statistical analysis. Some other key features of this version include support for more than 4 entity lists, and cross experiment analysis on chosen entity annotation. Try the new version of GeneSpring GX here.


GeneSpring GX

  • mRNA
  • miRNA
  • Variant analysis using VCF
  • Gene Expression NGS
  • Alternative Splicing
  • CGH
  • qPCR
  • Custom Arrays
  • Correlation Analysis
  • Metadata Framework for clustering view
  • Report Generation

Mass Profiler Professional

  • Proteomics
  • Metabolomics
  • Support for GC/MS, LC/MS, CE/MS and ICP-MS
  • Generic Import
  • Integrated ID Browser
  • Correlation Analysis
  • Metadata Framework for clustering view
  • Report Generation

Pathway Architect

  • Multi-omic Pathway Analysis
  • Network Discovery
  • Natural Language Processing
  • MeSH Networks
  • Support for KEGG pathways
  • BioCyc, Wikipathways, BioPax Level III
  • BridgeDb Mapping
  • Support for External Pathway Tools

NGS Bridge

  • Export of data objects from Strand NGS and import in GeneSpring
  • Data visualization
  • Correlation analysis
  • Pathway analysis